Garikoitz Lerma-Usabiaga

Kim, I., Kupers, E.R., Lerma-Usabiaga, G., & Grill-Spector, K. (2024). Characterizing spatiotemporal population receptive fields in human visual cortex with fMRI. Journal of Neuroscience, 44(2). Doi:10.1523/JNEUROSCI.0803-23.2023

Lerma-Usabiaga, G., Liu, M., Paz-Alonso, P.M., & Wandell, B.A. (2023). Reproducible Tract Profiles 2 (RTP2) suite, from diffusion MRI acquisition to clinical practice and research. Scientific Reports, 13(1). Doi:10.1038/s41598-023-32924-7

Liu, M., Lerma-Usabiaga, G., Clascá, F., & Paz-Alonso, P.M. (2023). High-Resolution Tractography Protocol to Investigate the Pathways between Human Mediodorsal Thalamic Nucleus and Prefrontal Cortex. Journal of Neuroscience, 43(46), 7780-7798. Doi:10.1523/JNEUROSCI.0721-23.2023

Tregidgo, H.F.J., Soskic, S., Althonayan, J., Maffei, C., Van Leemput, K., Golland, P., Insausti, R., Lerma-Usabiaga, G., Caballero-Gaudes, C., Paz-Alonso, P.M., Yendiki, A., Alexander, D.C., Bocchetta, M., Rohrer, J.D., & Iglesias, J.E. (2023). Accurate Bayesian segmentation of thalamic nuclei using diffusion MRI and an improved histological atlas. NeuroImage, 274. Doi:10.1016/j.neuroimage.2023.120129

Iturbe, X., Alberdi, X., Aramburu, A., Astarloa, A., Barandiaran, I., Basterretxea, K., Davila, A., Erramuzpe, A., Gabilondo, I., Lerma-Usabiaga, G., Monsalve, L., Mori, L., Navaridas, J., Pascual, J.A., Piriz, J., Rodrigues, S., Seijo, O., Soraluze, A., Soria, E., Torres, I., Uriarte, N., & Valerdi, J.L. (2023). SilionBurmuin: A Horizon Europe propelled Neurocomputing Initiative in the Basque Country. Proceedings - 2023 49th Euromicro Conference on Software Engineering and Advanced Applications, SEAA 2023, 429-431. Doi:10.1109/SEAA60479.2023.00070

Liu, M., Lerma-Usabiaga, G., Clascá, F., & Paz-Alonso, P.M. (2022). Reproducible protocol to obtain and measure first-order relay human thalamic white-matter tracts. NeuroImage, 262. Doi:10.1016/j.neuroimage.2022.119558

Linhardt, D., Pawloff, M., Woletz, M., Hummer, A., Tik, M., Vasileiadi, M., Ritter, M., Lerma-Usabiaga, G., Schmidt-Erfurth, U., & Windischberger, C. (2022). Intrasession and Intersession Reproducibility of Artificial Scotoma pRF Mapping Results at UltraHigh Fields. eNeuro, 9(5). Doi:10.1523/ENEURO.0087-22.2022

Schilling, K.G., Rheault, F., Petit, L., Hansen, C.B., Nath, V., Yeh, F.C., Girard, G., Barakovic, M., Rafael-Patino, J., Yu, T., Fischi-Gomez, E., Pizzolato, M., Ocampo-Pineda, M., Schiavi, S., Canales-Rodríguez, E.J., Daducci, A., Granziera, C., Innocenti, G., Thiran, J.P., Mancini, L., Wastling, S., Cocozza, S., Petracca, M., Pontillo, G., Mancini, M., Vos, S.B., Vakharia, V.N., Duncan, J.S., Melero, H., Manzanedo, L., Sanz-Morales, E., Peña-Melián, Á., Calamante, F., Attyé, A., Cabeen, R.P., Korobova, L., Toga, A.W., Vijayakumari, A.A., Parker, D., Verma, R., Radwan, A., Sunaert, S., Emsell, L., De Luca, A., Leemans, A., Bajada, C.J., Haroon, H., Azadbakht, H., Chamberland, M., Genc, S., Tax, C.M.W., Yeh, P.H., Srikanchana, R., Mcknight, C.D., Yang, J.Y.M., Chen, J., Kelly, C.E., Yeh, C.H., Cochereau, J., Maller, J.J., Welton, T., Almairac, F., Seunarine, K.K., Clark, C.A., Zhang, F., Makris, N., Golby, A., Rathi, Y., O'Donnell, L.J., Xia, Y., Aydogan, D.B., Shi, Y., Fernandes, F.G., Raemaekers, M., Warrington, S., Michielse, S., Ramírez-Manzanares, A., Concha, L., Aranda, R., Meraz, M.R., Lerma-Usabiaga, G., Roitman, L., Fekonja, L.S., Calarco, N., Joseph, M., Nakua, H., Voineskos, A.N., Karan, P., Grenier, G., Legarreta, J.H., Adluru, N., Nair, V.A., Prabhakaran, V., Alexander, A.L., Kamagata, K., Saito, Y., Uchida, W., Andica, C., Abe, M., & Bayrak, R.G. (2021). Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?. NeuroImage, 243. Doi:10.1016/j.neuroimage.2021.118502

Lerma-Usabiaga, G., Winawer, J., & Wandell, B.A. (2021). Population receptive field shapes in early visual cortex are nearly circular. Journal of Neuroscience, 41(11), 2420-2427. Doi:10.1523/JNEUROSCI.3052-20.2021

Tozzi, L., Staveland, B., Holt-Gosselin, B., Chesnut, M., Chang, S.E., Choi, D., Shiner, M., Wu, H., Lerma-Usabiaga, G., Sporns, O., Barch, D.M., Gotlib, I.H., Hastie, T.J., Kerr, A.B., Poldrack, R.A., Wandell, B.A., Wintermark, M., & Williams, L.M. (2020). The human connectome project for disordered emotional states: Protocol and rationale for a research domain criteria study of brain connectivity in young adult anxiety and depression. NeuroImage, 214. Doi:10.1016/j.neuroimage.2020.116715

Lerma-Usabiaga, G., Benson, N., Winawer, J., & Wandell, B.A. (2020). A validation framework for neuroimaging software: The case of population receptive fields. PLoS Computational Biology, 16(6). Doi:10.1371/journal.pcbi.1007924

Grotheer, M., Zhen, Z., Lerma-Usabiaga, G., & Grill-Spector, K. (2019). Separate lanes for adding and reading in the white matter highways of the human brain. Nature Communications, 10(1). Doi:10.1038/s41467-019-11424-1

Lerma-Usabiaga, G., Mukherjee, P., Ren, Z., Perry, M.L., & Wandell, B.A. (2019). Replication and generalization in applied neuroimaging. NeuroImage, 202. Doi:10.1016/j.neuroimage.2019.116048

Iglesias, J.E., Insausti, R., Lerma-Usabiaga, G., Bocchetta, M., Van Leemput, K., Greve, D.N., van der Kouwe, A., Fischl, B., Caballero-Gaudes, C., & Paz-Alonso, P.M. (2018). A probabilistic atlas of the human thalamic nuclei combining ex vivo MRI and histology. NeuroImage, 183, 314-326. Doi:10.1016/j.neuroimage.2018.08.012

Lerma-Usabiaga, G., Carreiras, M., & Paz-Alonso, P.M. (2018). Converging evidence for functional and structural segregation within the left ventral occipitotemporal cortex in reading. Proceedings of the National Academy of Sciences of the United States of America, 115(42), E9981-E9990. Doi:10.1073/pnas.1803003115

Paz-Alonso, P.M., Oliver, M., Lerma-Usabiaga, G., Caballero-Gaudes, C., Quiñones, I., Suárez-Coalla, P., Duñabeitia, J.A., Cuetos, F., & Carreiras, M. (2018). Neural correlates of phonological, orthographic and semantic reading processing in dyslexia. NeuroImage: Clinical, 20, 433-447. Doi:10.1016/j.nicl.2018.08.018

Iglesias, J.E., Lerma-Usabiaga, G., Garcia-Peraza-Herrera, L.C., Martinez, S., & Paz-Alonso, P.M. (2017). Retrospective head motion estimation in structural brain MRI with 3D CNNs. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 10434 LNCS, 314-322. Doi:10.1007/978-3-319-66185-8_36

Lerma-Usabiaga, G., Iglesias, J.E., Insausti, R., Greve, D.N., & Paz-Alonso, P.M. (2016). Automated segmentation of the human hippocampus along its longitudinal axis. Human Brain Mapping, 37(9), 3353-3367. Doi:10.1002/hbm.23245

Iglesias, J.E., Paz-Alonso, P., Lerma-Usabiaga, G., Insausti, R., Miller, K., & Caballero-Gaudes, C. (2016). Simultaneous Bayesian correction of slab boundary artifacts and bias field for high resolution ex vivo MRI. Proceedings - International Symposium on Biomedical Imaging, 2016-June, 1384-1387. Doi:10.1109/ISBI.2016.7493525

Lizarazu, M., Lallier, M., Molinaro, N., Bourguignon, M., Paz-Alonso, P.M., Lerma-Usabiaga, G., & Carreiras, M. (2015). Developmental evaluation of atypical auditory sampling in dyslexia: Functional and structural evidence. Human Brain Mapping, 36(12), 4986-5002. Doi:10.1002/hbm.22986

Pérez, A., García-Pentón, L., Canales-Rodríguez, E.J., Lerma-Usabiaga, G., Iturria-Medina, Y., Román, F.J., Davidson, D., Alemán-Gómez, Y., Acha, J., & Carreiras, M. (2014). Brain morphometry of Dravet Syndrome. Epilepsy Research, 108(8), 1326-1334. Doi:10.1016/j.eplepsyres.2014.06.006